circos (ambiguous, available in 2 overlays)
- Ebuilds: 2, Testing: 0.69.9 Description:
Circos visualizes data in a circular layout — this makes Circos
ideal for exploring relationships between objects or
positions. Circos is ideal for creating publication-quality
infographics and illustrations with a high data-to-ink ratio, richly
layered data and pleasant symmetries. You have fine control each element
in the figure to tailor its focus points and detail to your audience.
Homepage:http://circos.ca/ License: GPL-2+ GPL-3+
dash
- Ebuilds: 6, Testing: 3.4.0 Description:
Dash is a productive Python framework for building web analytic
applications.
Written on top of Flask, Plotly.js, and React.js, Dash is ideal for
building data visualization apps with highly custom user interfaces in
pure Python. It's particularly suited for anyone who works with data in
Python.
Through a couple of simple patterns, Dash abstracts away all of the
technologies and protocols that are required to build an interactive
web-based application. Dash is simple enough that you can bind a user
interface around your Python code in an afternoon.
Dash apps are rendered in the web browser. You can deploy your apps to
servers and then share them through URLs. Since Dash apps are viewed in
the web browser, Dash is inherently cross-platform and mobile ready.
Dash ships with supercharged components for interactive user
interfaces. A core set of components, written and maintained by the
Dash team, is available in the dash-core-components library.
Homepage:https://github.com/plotly/dash License: MIT
epix
- Ebuilds: 2, Stable: 1.2.19-r1, Testing: 1.2.19-r1 Description:
ePiX creates mathematically accurate figures, plots, and
movies using easy-to-learn syntax. The output is expressly suitable
for use with LaTeX; figures may be written in a LaTeX picture
environment containing PSTricks, tikz, or eepic macros, or as vector
(EPS or PDF) image files. The user interface resembles that of
LaTeX: You prepare a human-readable scene description in a text
editor, then compile the input file into a picture.
use ePiX, however.
Homepage:https://mathcs.holycross.edu/~ahwang/current/ePiX.html License: GPL-2
fig2sxd
- Ebuilds: 1, Testing: 0.23 Description: Utility to convert files in xfig format to OpenOffice.org Draw format
Homepage:https://gitlab.com/acfbuerger/fig2sxd License: GPL-2
fiji-bin
- Ebuilds: 1, Testing: 20260307_p1417 Description: ImageJ distribution with a lot of plugins for scientific image processing
Homepage:http://fiji.sc/ License: BSD GPL-3+ public-domain
fityk
- Ebuilds: 1, Testing: 1.3.2-r1 Description:
Fityk is a program for nonlinear fitting of analytical functions
(especially peak-shaped) to data. It can also be used to display
data or to remove baseline from data.
It is reported to be used in crystallography, chromatography,
photoluminescence, infrared and Raman spectroscopy and other fields.
Fityk knows about common peak-shaped functions (Gaussian, Lorentzian,
Voigt, Pearson VII, bifurcated Gaussian, EMG, Doniach-Sunjic, etc.) and
polynomials. It also supports user-defined functions.
Fityk offers a graphical interface (and also command line
interface), various optimization methods (standard Marquardt
least-squares algorithm, Genetic Algorithms, Nelder-Mead simplex),
equality constraints, modeling error of x coordinate of points
(eg. zero-shift of instrument), handling series of datasets,
automation of common tasks with scripts, and more.
Homepage:https://fityk.nieto.pl/ License: GPL-2
forge
- Ebuilds: 3, Testing: 9999 Description:
A prototype of the OpenGL interop library that can be used with
ArrayFire. The goal of Forge is to provide high performance OpenGL
visualizations for C/C++ applications that use CUDA/OpenCL. Forge
uses OpenGL >=3.3 forward compatible contexts, so please make sure
you have capable hardware before trying it out.
Homepage:http://www.arrayfire.com/
fsleyes
- Ebuilds: 1, Testing: 1.5.0 Description:
FSLeyes is a viewer for 3D and 4D neuroimaging data. It is intended as a
replacement for the much loved FSLView. FSLeyes offers similar functionality
to FSLView, and aims to improve and expand upon this functionality in many
ways.
Homepage:https://git.fmrib.ox.ac.uk/fsl/fsleyes/fsleyes/tree/master License: Apache-2.0
fsleyes-props
- Ebuilds: 1, Testing: 1.8.2 Description:
FSLeyes-props is a library which is used by FSLeyes, and which allows you to
listen for change to attributes on a python object, automatically generate
wxpython widgets which are bound to attributes of a python object, and
automatically generate a command line interface to set values of the attributes
of a Python object.
Homepage:https://git.fmrib.ox.ac.uk/fsl/fsleyes/fsleyes/tree/master License: BSD
fsleyes-widgets
- Ebuilds: 1, Testing: 0.12.3 Description:
The fsleyes-widgets package contains a collection of GUI widgets and
utilities, based on wxPython, which are These widgets are used by
fsleyes-props and FSLeyes.
Homepage:https://git.fmrib.ox.ac.uk/fsl/fsleyes/fsleyes/tree/master License: BSD
g3data
- Ebuilds: 1, Stable: 1.5.4, Testing: 1.5.4 Description:
g3data is used for extracting data from graphs. In publications graphs are
often included, but the actual data is not. g3data makes the extraction
process much easier.
Homepage:https://github.com/pn2200/g3data License: GPL-2
ggobi
- Ebuilds: 1, Stable: 2.1.12-r1, Testing: 2.1.12-r1 Description:
GGobi is an open source visualization program for exploring
high-dimensional data. It provides highly dynamic and interactive
graphics such as tours, as well as familiar graphics such as the
scatterplot, barchart and parallel coordinates plots. Plots are
interactive and linked with brushing and identification.
Homepage:http://www.ggobi.org/ License: CPL-1.0
gle
- Ebuilds: 2, Testing: 4.3.9 Description:
GLE (Graphics Layout Engine) is a high-quality graphics package for
scientists, combining a user-friendly scripting language with a full
range of facilities for producing publication-quality graphs,
diagrams, posters and slides.
Homepage:https://glx.sourceforge.io/ https://github.com/vlabella/GLE/ License: BSD gui? ( GPL-2+ )
gnuplot
- Ebuilds: 4, Stable: 6.0.3, Testing: 6.1.9999 Description:
Gnuplot is a command-driven interactive function plotting program.
It can be used to plot functions and data points in both two- and
three-dimensional plots in many different formats. It is designed
primarily for the visual display of scientific data.
Homepage:http://www.gnuplot.info/ License: gnuplot
gnuplotutils
- Ebuilds: 1
Description:
A perl script to generate plots for publications using gnuplot
and a shell script to speed up work with gnuplot
Homepage:https://github.com/junghans/gnuplotutils License: GPL-2
gr
- Ebuilds: 1, Testing: 0.73.6-r1 Description: Universal framework for cross-platform visualization applications
Homepage:https://gr-framework.org/ License: MIT
grace
- Ebuilds: 1, Testing: 5.1.25_p18 Description:
Grace is a point-and-click tool that allows the user to draw X-Y
plots. This is the program formerly known as Xmgr.
A few of its features are: user defined scaling, tick marks, labels,
symbols, line styles, colors. Polynomial regression, splines, running
averages, DFT/FFT, cross/auto-correlation. Batch mode for unattended
plotting. Hardcopy support for PostScript, FrameMaker and several
image formats.
Homepage:https://plasma-gate.weizmann.ac.il/Grace/ License: GPL-2 LGPL-2
gwyddion (ambiguous, available in 2 overlays)
- Ebuilds: 7, Stable: 2.69, Testing: 2.69, 2.62 Description:
Gwyddion is a modular program for SPM data analysis. Primarily it is
supposed to be used for analysis of height fields obtained by means of
scanning probe microscopy techniques (AFM, MFM, STM, NSOM), but
generally it can be used for any other height field analysis or
image analysis.
Homepage:http://gwyddion.net/ License: GPL-2
kst
- Ebuilds: 1, Testing: 2.1.0_p20260208-r1 Description: Fast real-time large-dataset viewing and plotting tool
Homepage:https://kst-plot.kde.org/ License: GPL-2 LGPL-2 FDL-1.2
mricrogl
- Ebuilds: 2, Testing: 1.2.20220720-r1 Description:
MRIcroGL is a program designed to display 3D medical imaging.
By using your computer's graphics card, it can allow real-time
interactive rendering. It includes scripts to show you some of
the many effects.
Homepage:https://github.com/neurolabusc/MRIcroGL License: BSD
paraview
- Ebuilds: 3, Testing: 6.0.1 Description: Powerful scientific data visualization application
Homepage:https://www.paraview.org License: BSD MIT PSF-2 VTK
quickplot
- Ebuilds: 1, Stable: 1.0.1_rc, Testing: 1.0.1_rc Description:
Quickplot is a fast interactive 2D plotter with infinite zooming, value
picking, pipe input, and unlimited plots displayed. Quickplot is meant for
looking at your data quickly and of secondary importance is making static
pictures of your data. It's a data viewer, not a plot editor. It reads
ASCII text and sound files. It has lots of command line options, making it
very shell script friendly.
Homepage:
http://quickplot.sourceforge.net/
https://github.com/lanceman2/quickplot License: GPL-3
specgram
- Ebuilds: 2, Stable: 0.9.3, Testing: 0.9.2 Description: Small program that computes and plots spectrograms, either in a live window or to disk, with support for stdin input.
Homepage:https://github.com/rimio/specgram License: MIT
surf-ice
- Ebuilds: 2, Testing: 1.0.20201102 Description:
Surf Ice is an open source surface render. It supports
mesh formats including 3DS, CTM, DXF, FreeSurfer, GII
(GIfTI), GTS, LWO2, MS3D, MZ3, NV (BrainNetViewer), OBJ,
OFF, PLY, STL, VTK. It also supports tractography formats
including BFloat, PDB, TCK, TRK, and VTK. Further, the
software supports the NIfTI voxelwise format
Homepage:https://github.com/neurolabusc/surf-ice License: BSD
veusz
- Ebuilds: 1, Testing: 4.0 Description:
A Qt based scientific plotting package written in Python using PyQt. It is
designed to produce publication ready Postscript output. It provides a GUI,
command line and scripting interface (based on Python) to its plotting
facilities.
Homepage:https://veusz.github.io/ License: GPL-2
visidata
- Ebuilds: 2, Testing: 3.3 Description:
A tool that lets you quickly open, explore, summarize, and analyze
datasets in your computer’s terminal. VisiData works with CSV files,
Excel spreadsheets, SQL databases, and many other data sources.
Homepage:https://github.com/saulpw/visidata License: GPL-3
xd3d
- Ebuilds: 2, Testing: 8.3.1-r3 Description:
xd3d is a simple scientific visualization tool designed to be easy to learn.
It can plot 2d and 3d meshes, with shadowing, contour plots, vector fields,
iso-contour (3d), as well as 3d surfaces z=f(x,y) defined by an algebraic
expression or a cloud of points. It generates high quality vector PostScript
files for scientific publications and still or animated bitmap images.
It includes the graph plotter xgraphic.
Homepage:https://www.ljll.fr/jouve/xd3d/ License: GPL-2
xgraph
- Ebuilds: 2, Testing: 12.1-r6 Description:
Accepts data files or stdin in a form similar to the unix program
graph and displays line graphs, scatter plots, or bar charts on an
X11 display. Fully annotated with title, axis numbering and
labels, and legend. Zooming with the mouse is supported. Can
generate hardcopy output to Postscript printers and HPGL
plotters. Output can be directly pasted into idraw (drawtool) for
further annotation. Particularly useful in shell scripts.
Homepage:https://www.isi.edu/nsnam/xgraph/ License: xgraph
xyscan
- Ebuilds: 1, Testing: 4.6.6 Description:
xyscan is a tool for scientist in the need to extract data points,
i.e. numeric values, from a plot. It allows to scan the plots and
extract data points including the size of the error bars (both in x
and y). It can handle plots with linear and logarithmic scales.
Homepage:https://rhig.physics.yale.edu/~ullrich/software/xyscan License: GPL-2