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Install

Install this package:

emerge -a sci-medical/Slicer

If the package is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask sci-medical/Slicer

Or alternatively:

emerge --autounmask-write -a sci-medical/Slicer

Package Information

Description:

3D Slicer is a free, open source software package for visualization and analysis of medical images, including MRI, CT, PET, and ultrasound. It is used by researchers and clinicians worldwide for a wide range of applications, including image-guided surgery, radiation therapy planning, neuroimaging, and cardiac imaging. The software provides a comprehensive set of tools and algorithms for image analysis, segmentation, registration, and visualization, as well as support for a wide range of file formats, including DICOM. It also includes an extensible architecture that allows for the development of custom modules and extensions, making it highly customizable and adaptable to a wide range of use cases. 3D Slicer has a user-friendly interface that supports both novice and advanced users, with features such as customizable layouts, interactive slice viewers, and 3D rendering. It also includes a range of advanced features for power users, including scripting, batch processing, and GPU acceleration. Overall, 3D Slicer is a powerful and versatile tool for medical image analysis and visualization, with a strong user community and ongoing development support.

Homepage:

https://www.slicer.org/

License:

BSD

Versions

Metadata

Description

• 3D Slicer is a free, open source software package for visualization and analysis of medical images, including MRI, CT, PET, and ultrasound. It is used by researchers and clinicians worldwide for a wide range of applications, including image-guided surgery, radiation therapy planning, neuroimaging, and cardiac imaging. The software provides a comprehensive set of tools and algorithms for image analysis, segmentation, registration, and visualization, as well as support for a wide range of file formats, including DICOM. It also includes an extensible architecture that allows for the development of custom modules and extensions, making it highly customizable and adaptable to a wide range of use cases. 3D Slicer has a user-friendly interface that supports both novice and advanced users, with features such as customizable layouts, interactive slice viewers, and 3D rendering. It also includes a range of advanced features for power users, including scripting, batch processing, and GPU acceleration. Overall, 3D Slicer is a powerful and versatile tool for medical image analysis and visualization, with a strong user community and ongoing development support.

Maintainers

• Rafael Palomar (rafael.palomar@rr-research.no) - Type: person

Upstream

• Bugs: https://github.com/Slicer/Slicer/issues
• Remote IDs:
  • github: Slicer/Slicer

<pkgmetadata>
	<maintainer type="person">
		<email>rafael.palomar@rr-research.no</email>
		<name>Rafael Palomar</name>
	</maintainer>
	<longdescription>
    3D Slicer is a free, open source software package for visualization and analysis of medical images, including MRI, CT, PET, and ultrasound. It is used by researchers and clinicians worldwide for a wide range of applications, including image-guided surgery, radiation therapy planning, neuroimaging, and cardiac imaging.

    The software provides a comprehensive set of tools and algorithms for image analysis, segmentation, registration, and visualization, as well as support for a wide range of file formats, including DICOM. It also includes an extensible architecture that allows for the development of custom modules and extensions, making it highly customizable and adaptable to a wide range of use cases.

    3D Slicer has a user-friendly interface that supports both novice and advanced users, with features such as customizable layouts, interactive slice viewers, and 3D rendering. It also includes a range of advanced features for power users, including scripting, batch processing, and GPU acceleration.

    Overall, 3D Slicer is a powerful and versatile tool for medical image analysis and visualization, with a strong user community and ongoing development support.
  </longdescription>
	<use>
		<flag name="python">Build python support</flag>
		<flag name="cli">Build command-line-interface support</flag>
		<flag name="DICOM">Build DICOM support</flag>
	</use>
	<upstream>
		<bugs-to>https://github.com/Slicer/Slicer/issues</bugs-to>
		<remote-id type="github">Slicer/Slicer</remote-id>
	</upstream>
</pkgmetadata>

Lint Warnings

• [Error] Missing md5-cache for ebuild Slicer-9999
• Note: category 'sci-medical' is not in the main gentoo categories list

USE Flags

Manage flags for this package: euse -i <flag> -p sci-medical/Slicer | euse -E <flag> -p sci-medical/Slicer | euse -D <flag> -p sci-medical/Slicer

Files

• 0001-COMP-Add-vtk-CommonSystem-component-as-requirement.patch
• 0002-COMP-Find-Eigen-required.patch
• 0003-COMP-Adapt-to-new-qRestAPI-cmake.patch
• 0004-ENH-Make-optional-the-use-of-Slicer-ITK.patch
• 0005-ENH-Remove-conditional-code-for-old-VTK.patch
• 0006-ENH-Limit-CPack-on-non-superbuild-mode.patch
• 0007-ENH-Install-testing-data-only-with-testing-support.patch
• 0008-ENH-Remove-the-App-real-suffix-from-Slicer-executabl.patch
• 0009-ENH-Use-CMake-GNUInstallDirs-in-Slicer-directories.patch
• 0010-ENH-Use-slicer-installation-dirs-for-base-dev-compon.patch
• 0011-ENH-Add-variable-install-dirs-for-Libs-dev-files.patch
• 0012-ENH-Generate-and-Install-SlicerConfig-install-tree.patch
• 0013-ENH-Make-installed-CMake-files-available.patch
• 0014-ENH-Add-CTK-as-requirement-in-UseSlicer.cmake.patch
• 0015-ENH-Add-vtkAddon-as-a-requirement-in-UseSlicer.cmake.patch
• 0016-ENH-Remove-extension-launcher-cmake-code-from-UseSli.patch
• 0017-ENH-Installation-and-setup-qSlicerExport.h.in.patch
• 0018-ENH-Add-templates-infrastructure.patch
• 0019-ENH-Update-SlicerInstallConfig.patch
• 0020-ENH-Enable-installation-of-SLicerBase-header-files.patch
• 0021-ENH-Fix-qt-loadable-modules-installation-dirs.patch
• 0022-ENH-Provide-an-install-version-of-vtkSlicerConfigure.patch
• 0023-ENH-Update-Slicer-build-macros.patch
• 0024-ENH-Enable-installation-of-Libs-dev-files.patch
• 0025-ENH-Make-Testing-subdirs-subject-to-BUILD_TESTING.patch
• 0026-ENH-Add-python-support.patch
• 0027-ENH-Disable-variable-setting-in-UseSlicer.cmake.in.patch
• 0028-COMP-Fix-missing-QSslConfiguration-include.patch
• 0029-BAD-ENH-Enable-installation-of-utility-scripts.patch
• 0030-GOOD-ENH-Add-installation-of-generated-Qt-header-fil.patch
• 0031-GOOD-ENH-Enable-installation-of-resources.patch
• 0032-UGLY-ENH-Fix-python-wrap-conditionals.patch
• FindPythonQt.cmake
• Slicer
• SlicerLauncherSettings.ini

Manifest