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Package Information

Description:

Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler

Homepage:

https://www.bcgsc.ca/resources/software/abyss/

License:

GPL-3

Versions

Metadata

Maintainers

• Gentoo Biology Project (sci-biology@gentoo.org) - Type: project

Upstream

• Remote IDs:
  • github: bcgsc/abyss

<pkgmetadata>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
	<use>
		<flag name="misc-haskell">build abyss-samtobreak tool, pull in haskell toolchain</flag>
	</use>
	<upstream>
		<remote-id type="github">bcgsc/abyss</remote-id>
	</upstream>
</pkgmetadata>

Lint Warnings

• [Warning] Ebuild 2.3.4 uses IUSE flag 'openmp' which is not documented in metadata.xml. Add the flag to metadata.xml <use> section.
• [Warning] Missing md5-cache for version 2.3.4. Run 'ebuild <ebuild_file> manifest' or 'egencache' to generate it.

USE Flags

Manifest