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Install

Install this package:

emerge -a sci-biology/bedtools

If the package is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask sci-biology/bedtools

Or alternatively:

emerge --autounmask-write -a sci-biology/bedtools

Package Information

Description:

Tools for manipulation and analysis of BED, GFF/GTF, VCF, SAM/BAM file formats

Homepage:

https://bedtools.readthedocs.io/

License:

GPL-2

Versions

Metadata

Maintainers

• Gentoo Biology Project (sci-biology@gentoo.org) - Type: project

Upstream

• Remote IDs:
  • google-code: bedtools
  • github: arq5x/bedtools2

<pkgmetadata>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
	<upstream>
		<remote-id type="google-code">bedtools</remote-id>
		<remote-id type="github">arq5x/bedtools2</remote-id>
	</upstream>
</pkgmetadata>

Lint Warnings

• [Warning] USE flag 'test' in ebuild 2.31.1 is not documented in metadata.xml
• [Error] Missing md5-cache for ebuild bedtools-2.31.1

USE Flags

Manage flags for this package: euse -i <flag> -p sci-biology/bedtools | euse -E <flag> -p sci-biology/bedtools | euse -D <flag> -p sci-biology/bedtools

Files

• bedtools-2.31.1-buildsystem.patch
• bedtools-2.31.1-includes.patch
• bedtools-2.31.1-python.patch

Manifest