Gentoo Packages

sci-biology/bfast - 0.7.0a (gentoo)

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Install

Install this version:

emerge -a =sci-biology/bfast-0.7.0a

If this version is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask =sci-biology/bfast-0.7.0a

Or alternatively:

emerge --autounmask-write -a =sci-biology/bfast-0.7.0a

Package Information

Description:
Blat-like Fast Accurate Search Tool
Homepage:
https://sourceforge.net/projects/bfast/
License:
GPL-2

Ebuild Details

Version EAPI Keywords Slot
0.7.0a 8 ~amd64 ~x86 0
View Raw Ebuild 
# Copyright 1999-2025 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=8

inherit autotools

DESCRIPTION="Blat-like Fast Accurate Search Tool"
HOMEPAGE="https://sourceforge.net/projects/bfast/"
SRC_URI="https://downloads.sourceforge.net/${PN}/${P}.tar.gz"

LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="test"
RESTRICT="test" # tests broken, upstream unresponsive

RDEPEND="dev-perl/XML-Simple"

PATCHES=(
	"${FILESDIR}"/${P}-autotools.patch
	"${FILESDIR}"/${P}-test-sourcing.patch
	"${FILESDIR}"/${P}-C99-inline.patch
	"${FILESDIR}"/${P}-gzeof.patch
)

src_prepare() {
	default
	eautoreconf
}

USE Flags

Manage flags for this package: euse -i <flag> -p sci-biology/bfast | euse -E <flag> -p sci-biology/bfast | euse -D <flag> -p sci-biology/bfast

Global/Standard Flags

test

Inherited Eclasses

autotools

Dependencies

RDEPEND

dev-perl/XML-Simple

Manifest for 0.7.0a

Type File Size Source URLs
DIST bfast-0.7.0a.tar.gz 2456617 bytes https://downloads.sourceforge.net/bfast/bfast-0.7.0a.tar.gz