Gentoo Packages

sci-biology/bowtie (gentoo)

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Install

Install this package:

emerge -a sci-biology/bowtie

If the package is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask sci-biology/bowtie

Or alternatively:

emerge --autounmask-write -a sci-biology/bowtie

Package Information

Description:
Popular short read aligner for Next-generation sequencing data
Homepage:
https://bowtie-bio.sourceforge.net/bowtie2/
License:
GPL-3

Versions

Version EAPI Keywords Slot
2.5.1 8 ~amd64 ~x86 2

Metadata

Maintainers

Upstream

Raw Metadata XML 
<pkgmetadata>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
	<upstream>
		<remote-id type="sourceforge">bowtie-bio</remote-id>
	</upstream>
</pkgmetadata>

Lint Warnings

USE Flags

Manage flags for this package: euse -i <flag> -p sci-biology/bowtie | euse -E <flag> -p sci-biology/bowtie | euse -D <flag> -p sci-biology/bowtie

Flag Description 2.5.1
cpu_flags_x86_sse2 Use the SSE2 instruction set ✓
examples Install examples, usually source code ✓
test Enable dependencies and/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently) ✓

Manifest

Type File Size Versions
DIST bowtie2-2.5.1-source.zip 10528859 bytes 2.5.1
Unmatched Entries
Type File Size