Gentoo Packages

Search

Package Information

Description:

ELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif.

Homepage:

http://cbcb.umd.edu/software/ELPH/

License:

Artistic

Versions

Metadata

Description

• ELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif.

Maintainers

• Gentoo Biology Project (sci-biology@gentoo.org) - Type: project

<pkgmetadata>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
	<longdescription>
		ELPH is a general-purpose Gibbs sampler for finding motifs in a set of
		DNA or protein sequences. The program takes as input a set containing
		anywhere from a few dozen to thousands of sequences, and searches
		through them for the most common motif, assuming that each sequence
		contains one copy of the motif.
	</longdescription>
</pkgmetadata>

Lint Warnings

• [Warning] Missing md5-cache for version 1.0.1-r3. Run 'ebuild <ebuild_file> manifest' or 'egencache' to generate it.

Files

• elph-1.0.1-drop-register-keyword.patch
• elph-1.0.1-fix-build-system.patch

Manifest