Install this version:
emerge -a =sci-biology/embassy-esim4-1.0.0.660-r1If this version is masked, you can unmask it using the autounmask tool or standard emerge options:
autounmask =sci-biology/embassy-esim4-1.0.0.660-r1Or alternatively:
emerge --autounmask-write -a =sci-biology/embassy-esim4-1.0.0.660-r1# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
EBO_DESCRIPTION="sim4 - Alignment of cDNA and genomic DNA"
inherit autotools emboss-r3 flag-o-matic
KEYWORDS="~amd64 ~x86"
S="${WORKDIR}/ESIM4-1.0.0.650"
PATCHES=( "${FILESDIR}"/${PN}-1.0.0.650_fix-build-system.patch )
src_prepare() {
default
eautoreconf
}
src_configure() {
# -Werror=lto-type-mismatch
# https://bugs.gentoo.org/862258
#
# Upstream is dead since 2013.
filter-lto
emboss-r3_src_configure
}