Gentoo Packages

sci-biology/hmmer (gentoo)

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Install

Install this package:

emerge -a sci-biology/hmmer

If the package is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask sci-biology/hmmer

Or alternatively:

emerge --autounmask-write -a sci-biology/hmmer

Package Information

Description:
Sequence analysis using profile hidden Markov models
Homepage:
http://hmmer.org/
License:
GPL-3

Versions

Version EAPI Keywords Slot
3.1_beta2-r1 8 ~amd64 ~x86 0
2.3.2-r6 8 ~amd64 ~x86 2

Metadata

Maintainers

Raw Metadata XML 
<pkgmetadata>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
</pkgmetadata>

Lint Warnings

USE Flags

Manage flags for this package: euse -i <flag> -p sci-biology/hmmer | euse -E <flag> -p sci-biology/hmmer | euse -D <flag> -p sci-biology/hmmer

Flag Description 3.1_beta2-r1 2.3.2-r6
cpu_flags_ppc_altivec Use the AltiVec/VMX instruction set ✓ ✓
cpu_flags_x86_sse Use the SSE instruction set ✓ ✗
gsl Use the GNU scientific library for calculations ✓ ✗
mpi Add MPI (Message Passing Interface) layer to the apps that support it ✓ ✗
test Enable dependencies and/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently) ✓ ✓

Files

Manifest

Type File Size Versions
Unmatched Entries
Type File Size
DIST hmmer-2.3.2.tar.gz 1024933 bytes
DIST hmmer-3.1b2.tar.gz 5965253 bytes