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Package Information

Description:

Near-optimal RNA-Seq quantification

Homepage:

http://pachterlab.github.io/kallisto/

Versions

Metadata

Maintainers

• Gentoo Biology Project (sci-biology@gentoo.org) - Type: project

Upstream

• Remote IDs:
  • github: pachterlab/kallisto

<pkgmetadata>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
	<upstream>
		<remote-id type="github">pachterlab/kallisto</remote-id>
	</upstream>
</pkgmetadata>

Lint Warnings

• [Warning] Ebuild 0.46.2-r1 uses IUSE flag 'hdf5' which is not documented in metadata.xml. Add the flag to metadata.xml <use> section.
• [Warning] Missing md5-cache for version 0.46.2-r1. Run 'ebuild <ebuild_file> manifest' or 'egencache' to generate it.

USE Flags

Files

• kallisto-0.46.2-catch2.patch
• kallisto-0.46.2-cmake.patch
• kallisto-0.46.2-gcc11.patch
• kallisto-0.46.2-htslib.patch

Manifest