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Description:

Primer3 picks primers for PCR reactions, considering: oligonucleotide melting temperature, size, GC content, and primer-dimer possibilities; PCR product size; positional constraints within the source sequence; and miscellaneous other constraints. All of these criteria are user-specifiable as constraints, and some are specifiable as terms in an objective function that characterizes an optimal primer pair.

Homepage:

http://primer3.sourceforge.net/

License:

GPL-2

Versions

Metadata

Description

• Primer3 picks primers for PCR reactions, considering: oligonucleotide melting temperature, size, GC content, and primer-dimer possibilities; PCR product size; positional constraints within the source sequence; and miscellaneous other constraints. All of these criteria are user-specifiable as constraints, and some are specifiable as terms in an objective function that characterizes an optimal primer pair.

Maintainers

• Gentoo Biology Project (sci-biology@gentoo.org) - Type: project

Upstream

• Remote IDs:
  • sourceforge: primer3

<pkgmetadata>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
	<longdescription>
		Primer3 picks primers for PCR reactions, considering: oligonucleotide
		melting temperature, size, GC content, and primer-dimer possibilities;
		PCR product size; positional constraints within the source sequence;
		and miscellaneous other constraints. All of these criteria are
		user-specifiable as constraints, and some are specifiable as terms in
		an objective function that characterizes an optimal primer pair.
	</longdescription>
	<upstream>
		<remote-id type="sourceforge">primer3</remote-id>
	</upstream>
</pkgmetadata>

Lint Warnings

• [Warning] Missing md5-cache for version 2.3.7-r1. Run 'ebuild <ebuild_file> manifest' or 'egencache' to generate it.

Files

• primer3-2.3.7-buildsystem.patch
• primer3-2.3.7-gcc7.patch

Manifest