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Install this package:

emerge -a sci-chemistry/suitename

If the package is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask sci-chemistry/suitename

Or alternatively:

emerge --autounmask-write -a sci-chemistry/suitename

Package Information

Description:

Suitename is a new C program that supports the ROC RNA Ontology Consortium consensus RNA backbone nomenclature and conformer-list development (see our RNA backbone rotamer section. From dihedral-angle input for a specific RNA structure (usually from Dangle), Suitename categorizes the RNA backbone geometry of each suite (the sugar-to-sugar version of a residue) either as an outlier ("!!") or as belonging to one of the 53 defined conformer bins. The output is either a one-line-per-suite report, or a linear conformer string (as shown below the image here) in one of several variant formats. Suitename is built into MolProbity, producing entries in the multi-criterion chart for an RNA model and also a suitestring file. The Suitename code is made available here for bulk or individual command-line use.

Homepage:

http://kinemage.biochem.duke.edu/software/suitename.php

License:

richardson

Versions

Metadata

Description

• Suitename is a new C program that supports the ROC RNA Ontology Consortium consensus RNA backbone nomenclature and conformer-list development (see our RNA backbone rotamer section. From dihedral-angle input for a specific RNA structure (usually from Dangle), Suitename categorizes the RNA backbone geometry of each suite (the sugar-to-sugar version of a residue) either as an outlier ("!!") or as belonging to one of the 53 defined conformer bins. The output is either a one-line-per-suite report, or a linear conformer string (as shown below the image here) in one of several variant formats. Suitename is built into MolProbity, producing entries in the multi-criterion chart for an RNA model and also a suitestring file. The Suitename code is made available here for bulk or individual command-line use.

Maintainers

• Gentoo Chemistry Project (sci-chemistry@gentoo.org) - Type: project

<pkgmetadata>
	<maintainer type="project">
		<email>sci-chemistry@gentoo.org</email>
		<name>Gentoo Chemistry Project</name>
	</maintainer>
	<longdescription>
	Suitename is a new C program that supports the ROC RNA Ontology Consortium
	consensus RNA backbone nomenclature and conformer-list development (see our RNA
	backbone rotamer section.
	From dihedral-angle input for a specific RNA structure (usually from Dangle),
	Suitename categorizes the RNA backbone geometry of each suite (the
	sugar-to-sugar version of a residue) either as an outlier ("!!") or as belonging
	to one of the 53 defined conformer bins. The output is either a
	one-line-per-suite report, or a linear conformer string (as shown below the
	image here) in one of several variant formats. Suitename is built into
	MolProbity, producing entries in the multi-criterion chart for an RNA model and
	also a suitestring file. The Suitename code is made available here for bulk or
	individual command-line use.
	</longdescription>
</pkgmetadata>

Lint Warnings

• [Error] Missing md5-cache for ebuild suitename-0.3.070628

Files

• suitename-0.3.070628-Wimplicit-function-declaration.patch
• suitename-0.3.070628-makefile.patch

Manifest