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sci-chemistry/tm-align - 20150914-r1 (gentoo)

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Install

Install this version:

emerge -a =sci-chemistry/tm-align-20150914-r1

If this version is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask =sci-chemistry/tm-align-20150914-r1

Or alternatively:

emerge --autounmask-write -a =sci-chemistry/tm-align-20150914-r1

Package Information

Description:
Quick & Accurate Structural Alignment
Homepage:
https://zhanggroup.org/TM-align/
License:
tm-align

Ebuild Details

Version EAPI Keywords Slot
20150914-r1 8 amd64 ~ppc ppc64 ~x86 0
View Raw Ebuild 
# Copyright 1999-2025 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=8

inherit cmake flag-o-matic fortran-2

DESCRIPTION="Quick & Accurate Structural Alignment"
HOMEPAGE="https://zhanggroup.org/TM-align/"
SRC_URI="http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools${PV}.tar.gz"

LICENSE="tm-align"
SLOT="0"
KEYWORDS="amd64 ~ppc ppc64 ~x86"
IUSE="custom-cflags"

BDEPEND=">=dev-build/cmake-3.28"

src_unpack() {
	# S=${WORKDIR} is deprecated in cmake eclass
	mkdir "${P}" || die
	pushd "${P}" || die
		unpack ${A}
	popd || die
}

src_prepare() {
	cp "${FILESDIR}"/CMakeLists.txt . || die
	cmake_src_prepare

	# Recommended by upstream
	use custom-cflags || replace-flags -O* -O3 && append-fflags -ffast-math
}

USE Flags

Manage flags for this package: euse -i <flag> -p sci-chemistry/tm-align | euse -E <flag> -p sci-chemistry/tm-align | euse -D <flag> -p sci-chemistry/tm-align

Global/Standard Flags

custom-cflags

Inherited Eclasses

cmake
flag-o-matic
fortran-2

Dependencies

BDEPEND

>=dev-build/cmake-3.28