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Description:

Binding to the C samtools library, which reads and writes SAM format alignments, both binary and tab- delimited text formats. It also supports rapid access to specific alignments in a sorted BAM file and access to sequences from indexed Fasta files.

Homepage:

http://www.ingolia-lab.org/samtools-tutorial.html

License:

MIT

Versions

Metadata

Description

• Binding to the C samtools library, which reads and writes SAM format alignments, both binary and tab- delimited text formats. It also supports rapid access to specific alignments in a sorted BAM file and access to sequences from indexed Fasta files.

Maintainers

• Gentoo Haskell (haskell@gentoo.org) - Type: project

<pkgmetadata>
	<maintainer type="project">
		<email>haskell@gentoo.org</email>
		<name>Gentoo Haskell</name>
	</maintainer>
	<longdescription>
		Binding to the C samtools library, which reads and
		writes SAM format alignments, both binary and tab-
		delimited text formats. It also supports rapid access
		to specific alignments in a sorted BAM file and access
		to sequences from indexed Fasta files.
	</longdescription>
</pkgmetadata>

Lint Warnings

• [Warning] Missing md5-cache for version 0.2.4.3. Run 'ebuild <ebuild_file> manifest' or 'egencache' to generate it.

Manifest