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sci-biology/unafold - 3.8 (pkalin)

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Install

Install this version:

emerge -a =sci-biology/unafold-3.8

If this version is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask =sci-biology/unafold-3.8

Or alternatively:

emerge --autounmask-write -a =sci-biology/unafold-3.8

Package Information

Description:
Unified Nucleic Acid Folding and hybridization package
Homepage:
http://mfold.rna.albany.edu/
License:
unafold

Ebuild Details

Version EAPI Keywords Slot
3.8 7 ~amd64 ~x86 0
View Raw Ebuild 
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=7

inherit flag-o-matic

DESCRIPTION="Unified Nucleic Acid Folding and hybridization package"
HOMEPAGE="http://mfold.rna.albany.edu/"
SRC_URI="http://dinamelt.bioinfo.rpi.edu/download/${P}.tar.bz2"

LICENSE="unafold"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="custom-cflags +postscript"

DEPEND="postscript? ( >=sci-biology/mfold_util-4.7 )"
RDEPEND="${DEPEND}"

src_prepare() {
	# recommended in README
	use custom-cflags || append-flags -O3

	# version was not updated upstream apparently
	sed \
		-e 's:hybrid (UNAFold) 3.7:hybrid (UNAFold) 3.8:g' \
		-i tests/hybrid.tml || die
	eapply_user
}

USE Flags

Manage flags for this package: euse -i <flag> -p sci-biology/unafold | euse -E <flag> -p sci-biology/unafold | euse -D <flag> -p sci-biology/unafold

Global/Standard Flags

custom-cflags
postscript
❓ Default: Enabled (+)

Inherited Eclasses

flag-o-matic

Dependencies

DEPEND

postscript? ( >=sci-biology/mfold_util-4.7 )

RDEPEND

postscript? ( >=sci-biology/mfold_util-4.7 )

Manifest for 3.8

Type File Size Source URLs
DIST unafold-3.8.tar.bz2 282418 bytes http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2