Install this version:
emerge -a =sci-biology/snakemake-9.25.1If this version is masked, you can unmask it using the autounmask tool or standard emerge options:
autounmask =sci-biology/snakemake-9.25.1Or alternatively:
emerge --autounmask-write -a =sci-biology/snakemake-9.25.1| Version | EAPI | Keywords | Slot |
|---|---|---|---|
| 9.25.1 | 8 | ~amd64 | 0 |
# Copyright 1999-2026 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
DISTUTILS_USE_PEP517=setuptools
PYTHON_COMPAT=( python3_{11..13} )
inherit distutils-r1 pypi
DESCRIPTION="Workflow management system for reproducible and scalable data analyses"
HOMEPAGE="
https://snakemake.github.io
https://snakemake.readthedocs.io
https://github.com/snakemake/snakemake
https://pypi.org/project/snakemake/
"
LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64"
IUSE="reports"
RDEPEND="
dev-python/conda-inject[${PYTHON_USEDEP}]
dev-python/configargparse[${PYTHON_USEDEP}]
dev-python/connection_pool[${PYTHON_USEDEP}]
dev-python/docutils[${PYTHON_USEDEP}]
dev-python/dpath[${PYTHON_USEDEP}]
dev-python/gitpython[${PYTHON_USEDEP}]
dev-python/humanfriendly[${PYTHON_USEDEP}]
dev-python/immutables[${PYTHON_USEDEP}]
dev-python/jinja2[${PYTHON_USEDEP}]
dev-python/jsonschema[${PYTHON_USEDEP}]
dev-python/nbformat[${PYTHON_USEDEP}]
dev-python/packaging[${PYTHON_USEDEP}]
dev-python/platformdirs[${PYTHON_USEDEP}]
dev-python/psutil[${PYTHON_USEDEP}]
dev-python/pulp[${PYTHON_USEDEP}]
dev-python/pyyaml[${PYTHON_USEDEP}]
dev-python/referencing[${PYTHON_USEDEP}]
dev-python/requests[${PYTHON_USEDEP}]
dev-python/smart_open[${PYTHON_USEDEP}]
dev-python/snakemake-interface-common[${PYTHON_USEDEP}]
dev-python/snakemake-interface-executor-plugins[${PYTHON_USEDEP}]
dev-python/snakemake-interface-logger-plugins[${PYTHON_USEDEP}]
dev-python/snakemake-interface-report-plugins[${PYTHON_USEDEP}]
dev-python/snakemake-interface-scheduler-plugins[${PYTHON_USEDEP}]
dev-python/snakemake-interface-storage-plugins[${PYTHON_USEDEP}]
dev-python/sqlmodel[${PYTHON_USEDEP}]
dev-python/tabulate[${PYTHON_USEDEP}]
dev-python/tenacity[${PYTHON_USEDEP}]
dev-python/throttler[${PYTHON_USEDEP}]
dev-python/wrapt[${PYTHON_USEDEP}]
dev-python/yte[${PYTHON_USEDEP}]
reports? ( dev-python/pygments[${PYTHON_USEDEP}] )
"
BDEPEND="
dev-python/setuptools-scm[${PYTHON_USEDEP}]
"
distutils_enable_tests pytest
python_test() {
local -x PYTEST_DISABLE_PLUGIN_AUTOLOAD=1
epytest tests/test_expand.py tests/test_io.py tests/test_schema.py
}
Manage flags for this package:
euse -i <flag> -p sci-biology/snakemake |
euse -E <flag> -p sci-biology/snakemake |
euse -D <flag> -p sci-biology/snakemake
dev-python/conda-inject[] dev-python/configargparse[] dev-python/connection_pool[] dev-python/docutils[] dev-python/dpath[] dev-python/gitpython[] dev-python/humanfriendly[] dev-python/immutables[] dev-python/jinja2[] dev-python/jsonschema[] dev-python/nbformat[] dev-python/packaging[] dev-python/platformdirs[] dev-python/psutil[] dev-python/pulp[] dev-python/pyyaml[] dev-python/referencing[] dev-python/requests[] dev-python/smart_open[] dev-python/snakemake-interface-common[] dev-python/snakemake-interface-executor-plugins[] dev-python/snakemake-interface-logger-plugins[] dev-python/snakemake-interface-report-plugins[] dev-python/snakemake-interface-scheduler-plugins[] dev-python/snakemake-interface-storage-plugins[] dev-python/sqlmodel[] dev-python/tabulate[] dev-python/tenacity[] dev-python/throttler[] dev-python/wrapt[] dev-python/yte[] reports? ( dev-python/pygments[] )
dev-python/setuptools-scm[]