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dev-python/ChIP-R - 1.2.0 (pypi)

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Package Information

Description:
ChIP-R is a method for assessing the reproducibility of replicated ChIP-seq type experiments. It incorporates the rank product method, a novel thresholding methods, and the use of peak fragmentation return the most reproducible peaks.
Homepage:
https://github.com/rhysnewell/ChIP-R
License:
GPL-3

Ebuild Details

Version EAPI Keywords Slot
1.2.0 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="ChIP-R is a method for assessing the reproducibility of replicated ChIP-seq type experiments. It incorporates the rank product method, a novel thresholding methods, and the use of peak fragmentation return the most reproducible peaks."

HOMEPAGE="https://github.com/rhysnewell/ChIP-R"
LICENSE="GPL-3"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

Dependencies

RDEPEND

dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]

BDEPEND

dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]

Manifest for 1.2.0

Type File Size Source URLs
DIST ChIP-R-1.2.0.tar.gz 36765 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/ChIP-R/ChIP-R-1.2.0.tar.gz