Gentoo Packages

dev-python/HiNT-Package - 2.2.8 (pypi)

Search

Package Information

Description:
HiNT -- HiC for copy number vairations and translocations detection
Homepage:
https://github.com/suwangbio/HiNT_py3

Ebuild Details

Version EAPI Keywords Slot
2.2.8 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="HiNT -- HiC for copy number vairations and translocations detection"

HOMEPAGE="https://github.com/suwangbio/HiNT_py3"
LICENSE=""
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES=">=dev-python/h5py-2.8.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.16.1[${PYTHON_USEDEP}]
	dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/pypairix[${PYTHON_USEDEP}]
	dev-python/pairtools[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.0.1[${PYTHON_USEDEP}]
	>=dev-python/pandas-0.23.0[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-0.19.1[${PYTHON_USEDEP}]
	>=dev-python/multiprocess-0.70.5[${PYTHON_USEDEP}]
	dev-python/argparse[${PYTHON_USEDEP}]
	dev-python/pytabix[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

Dependencies

RDEPEND

>=dev-python/h5py-2.8.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.16.1[${PYTHON_USEDEP}]
	dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/pypairix[${PYTHON_USEDEP}]
	dev-python/pairtools[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.0.1[${PYTHON_USEDEP}]
	>=dev-python/pandas-0.23.0[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-0.19.1[${PYTHON_USEDEP}]
	>=dev-python/multiprocess-0.70.5[${PYTHON_USEDEP}]
	dev-python/argparse[${PYTHON_USEDEP}]
	dev-python/pytabix[${PYTHON_USEDEP}]

BDEPEND

>=dev-python/h5py-2.8.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.16.1[${PYTHON_USEDEP}]
	dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/pypairix[${PYTHON_USEDEP}]
	dev-python/pairtools[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.0.1[${PYTHON_USEDEP}]
	>=dev-python/pandas-0.23.0[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-0.19.1[${PYTHON_USEDEP}]
	>=dev-python/multiprocess-0.70.5[${PYTHON_USEDEP}]
	dev-python/argparse[${PYTHON_USEDEP}]
	dev-python/pytabix[${PYTHON_USEDEP}]

Manifest for 2.2.8

Type File Size Source URLs
DIST HiNT-Package-2.2.8.tar.gz 49335 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/HiNT-Package/HiNT-Package-2.2.8.tar.gz