dev-python/cardec - 1.0.3 (pypi)

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Package Information

Description:
A deep learning method for joint batch correction, denoting, and clustering of single-cell rna-seq data.
Homepage:
https://github.com/jlakkis/CarDEC

Ebuild Details

Version EAPI Keywords Slot
1.0.3 8 ~amd64 ~x86 0
View Raw Ebuild
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="A deep learning method for joint batch correction, denoting, and clustering of single-cell rna-seq data."

HOMEPAGE="https://github.com/jlakkis/CarDEC"
LICENSE=""
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES=">=dev-python/numpy-1.18.1[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.0.1[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.4.1[${PYTHON_USEDEP}]
	dev-python/tensorflow[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-0.22.2_p1[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/louvain[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

Dependencies

RDEPEND

>=dev-python/numpy-1.18.1[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.0.1[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.4.1[${PYTHON_USEDEP}]
	dev-python/tensorflow[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-0.22.2_p1[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/louvain[${PYTHON_USEDEP}]

BDEPEND

>=dev-python/numpy-1.18.1[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.0.1[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.4.1[${PYTHON_USEDEP}]
	dev-python/tensorflow[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-0.22.2_p1[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/louvain[${PYTHON_USEDEP}]

Manifest for 1.0.3

Type File Size Source URLs
DIST cardec-1.0.3.tar.gz 21279 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/cardec/cardec-1.0.3.tar.gz