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dev-python/cellxgene - 1.3.0 (pypi)

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Package Information

Description:
Web application for exploration of large scale scRNA-seq datasets
Homepage:
https://github.com/chanzuckerberg/cellxgene
License:
MIT

Ebuild Details

Version EAPI Keywords Slot
1.3.0 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Web application for exploration of large scale scRNA-seq datasets"

HOMEPAGE="https://github.com/chanzuckerberg/cellxgene"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="annotate prepare"
DEPENDENCIES="dev-python/anndata[${PYTHON_USEDEP}]
	>=dev-python/boto3-1.12.18[${PYTHON_USEDEP}]
	>=dev-python/click-7.1.2[${PYTHON_USEDEP}]
	>=dev-python/flask-3.0.0[${PYTHON_USEDEP}]
	>=dev-python/flask-compress-1.4.0[${PYTHON_USEDEP}]
	>=dev-python/flask-cors-3.0.9[${PYTHON_USEDEP}]
	dev-python/Flask-RESTful[${PYTHON_USEDEP}]
	dev-python/flask-server-timing[${PYTHON_USEDEP}]
	dev-python/flask-talisman[${PYTHON_USEDEP}]
	~dev-python/flatbuffers-2.0.7[${PYTHON_USEDEP}]
	dev-python/flatten-dict[${PYTHON_USEDEP}]
	>dev-python/fsspec-0.8.0[${PYTHON_USEDEP}]
	dev-python/gunicorn[${PYTHON_USEDEP}]
	>=dev-python/h5py-3.0.0[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	~dev-python/numpy-2.0.1[${PYTHON_USEDEP}]
	>=dev-python/packaging-20.0[${PYTHON_USEDEP}]
	>=dev-python/pandas-2.2.2[${PYTHON_USEDEP}]
	>=dev-python/pyyaml-5.4[${PYTHON_USEDEP}]
	>=dev-python/requests-2.22.0[${PYTHON_USEDEP}]
	dev-python/s3fs[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.4[${PYTHON_USEDEP}]
	dev-python/setuptools[${PYTHON_USEDEP}]
	prepare? ( dev-python/python-igraph[${PYTHON_USEDEP}] )
	prepare? ( dev-python/louvain[${PYTHON_USEDEP}] )
	prepare? ( dev-python/scanpy[${PYTHON_USEDEP}] )
	prepare? ( dev-python/umap-learn[${PYTHON_USEDEP}] )
	annotate? ( dev-python/mlflow[${PYTHON_USEDEP}] )
	annotate? ( dev-python/scanpy[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

USE Flags

annotate
prepare

Dependencies

RDEPEND

dev-python/anndata[${PYTHON_USEDEP}]
	>=dev-python/boto3-1.12.18[${PYTHON_USEDEP}]
	>=dev-python/click-7.1.2[${PYTHON_USEDEP}]
	>=dev-python/flask-3.0.0[${PYTHON_USEDEP}]
	>=dev-python/flask-compress-1.4.0[${PYTHON_USEDEP}]
	>=dev-python/flask-cors-3.0.9[${PYTHON_USEDEP}]
	dev-python/Flask-RESTful[${PYTHON_USEDEP}]
	dev-python/flask-server-timing[${PYTHON_USEDEP}]
	dev-python/flask-talisman[${PYTHON_USEDEP}]
	~dev-python/flatbuffers-2.0.7[${PYTHON_USEDEP}]
	dev-python/flatten-dict[${PYTHON_USEDEP}]
	>dev-python/fsspec-0.8.0[${PYTHON_USEDEP}]
	dev-python/gunicorn[${PYTHON_USEDEP}]
	>=dev-python/h5py-3.0.0[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	~dev-python/numpy-2.0.1[${PYTHON_USEDEP}]
	>=dev-python/packaging-20.0[${PYTHON_USEDEP}]
	>=dev-python/pandas-2.2.2[${PYTHON_USEDEP}]
	>=dev-python/pyyaml-5.4[${PYTHON_USEDEP}]
	>=dev-python/requests-2.22.0[${PYTHON_USEDEP}]
	dev-python/s3fs[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.4[${PYTHON_USEDEP}]
	dev-python/setuptools[${PYTHON_USEDEP}]
	prepare? ( dev-python/python-igraph[${PYTHON_USEDEP}] )
	prepare? ( dev-python/louvain[${PYTHON_USEDEP}] )
	prepare? ( dev-python/scanpy[${PYTHON_USEDEP}] )
	prepare? ( dev-python/umap-learn[${PYTHON_USEDEP}] )
	annotate? ( dev-python/mlflow[${PYTHON_USEDEP}] )
	annotate? ( dev-python/scanpy[${PYTHON_USEDEP}] )

BDEPEND

dev-python/anndata[${PYTHON_USEDEP}]
	>=dev-python/boto3-1.12.18[${PYTHON_USEDEP}]
	>=dev-python/click-7.1.2[${PYTHON_USEDEP}]
	>=dev-python/flask-3.0.0[${PYTHON_USEDEP}]
	>=dev-python/flask-compress-1.4.0[${PYTHON_USEDEP}]
	>=dev-python/flask-cors-3.0.9[${PYTHON_USEDEP}]
	dev-python/Flask-RESTful[${PYTHON_USEDEP}]
	dev-python/flask-server-timing[${PYTHON_USEDEP}]
	dev-python/flask-talisman[${PYTHON_USEDEP}]
	~dev-python/flatbuffers-2.0.7[${PYTHON_USEDEP}]
	dev-python/flatten-dict[${PYTHON_USEDEP}]
	>dev-python/fsspec-0.8.0[${PYTHON_USEDEP}]
	dev-python/gunicorn[${PYTHON_USEDEP}]
	>=dev-python/h5py-3.0.0[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	~dev-python/numpy-2.0.1[${PYTHON_USEDEP}]
	>=dev-python/packaging-20.0[${PYTHON_USEDEP}]
	>=dev-python/pandas-2.2.2[${PYTHON_USEDEP}]
	>=dev-python/pyyaml-5.4[${PYTHON_USEDEP}]
	>=dev-python/requests-2.22.0[${PYTHON_USEDEP}]
	dev-python/s3fs[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.4[${PYTHON_USEDEP}]
	dev-python/setuptools[${PYTHON_USEDEP}]
	prepare? ( dev-python/python-igraph[${PYTHON_USEDEP}] )
	prepare? ( dev-python/louvain[${PYTHON_USEDEP}] )
	prepare? ( dev-python/scanpy[${PYTHON_USEDEP}] )
	prepare? ( dev-python/umap-learn[${PYTHON_USEDEP}] )
	annotate? ( dev-python/mlflow[${PYTHON_USEDEP}] )
	annotate? ( dev-python/scanpy[${PYTHON_USEDEP}] )

Manifest for 1.3.0

Type File Size Source URLs
DIST cellxgene-1.3.0.tar.gz 2873128 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/cellxgene/cellxgene-1.3.0.tar.gz