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dev-python/chromosight - 1.6.3 (pypi)

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Package Information

Description:
Detect loops (and other patterns) in Hi-C contact maps.
Homepage:
https://github.com/koszullab/chromosight
License:
MIT

Ebuild Details

Version EAPI Keywords Slot
1.6.3 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Detect loops (and other patterns) in Hi-C contact maps."

HOMEPAGE="https://github.com/koszullab/chromosight"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/docopt[${PYTHON_USEDEP}]
	dev-python/jsonschema[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.3[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

Dependencies

RDEPEND

dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/docopt[${PYTHON_USEDEP}]
	dev-python/jsonschema[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.3[${PYTHON_USEDEP}]

BDEPEND

dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/docopt[${PYTHON_USEDEP}]
	dev-python/jsonschema[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.3[${PYTHON_USEDEP}]

Manifest for 1.6.3

Type File Size Source URLs
DIST chromosight-1.6.3.tar.gz 141980 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/chromosight/chromosight-1.6.3.tar.gz