Gentoo Packages

# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="DEPP: Deep Learning Enables Extending Species Trees using Single Genes"

HOMEPAGE="https://github.com/yueyujiang/DEPP"
LICENSE=""
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="~dev-python/numpy-1.22.3[${PYTHON_USEDEP}]
	dev-python/treeswift[${PYTHON_USEDEP}]
	dev-python/torch[${PYTHON_USEDEP}]
	~dev-python/pandas-1.4.2[${PYTHON_USEDEP}]
	dev-python/pytorch-lightning[${PYTHON_USEDEP}]
	dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/omegaconf[${PYTHON_USEDEP}]
	dev-python/apples[${PYTHON_USEDEP}]
	~dev-python/scipy-1.7.3[${PYTHON_USEDEP}]
	dev-python/DendroPy[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"