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dev-python/hicstuff - 3.2.4 (pypi)

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Package Information

Description:
General purpose stuff to generate and handle Hi-C data in its simplest form.
Homepage:
https://github.com/koszullab/hicstuff
License:
BSD

Ebuild Details

Version EAPI Keywords Slot
3.2.4 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="General purpose stuff to generate and handle Hi-C data in its simplest form."

HOMEPAGE="https://github.com/koszullab/hicstuff"
LICENSE="BSD"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="mappy"
DEPENDENCIES="dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.5.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.4.0[${PYTHON_USEDEP}]
	dev-python/docopt[${PYTHON_USEDEP}]
	dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/requests[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	dev-python/pyfastx[${PYTHON_USEDEP}]
	dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/pairtools[${PYTHON_USEDEP}]
	mappy? ( dev-python/mappy[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

USE Flags

mappy

Dependencies

RDEPEND

dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.5.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.4.0[${PYTHON_USEDEP}]
	dev-python/docopt[${PYTHON_USEDEP}]
	dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/requests[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	dev-python/pyfastx[${PYTHON_USEDEP}]
	dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/pairtools[${PYTHON_USEDEP}]
	mappy? ( dev-python/mappy[${PYTHON_USEDEP}] )

BDEPEND

dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.5.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.4.0[${PYTHON_USEDEP}]
	dev-python/docopt[${PYTHON_USEDEP}]
	dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/requests[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	dev-python/pyfastx[${PYTHON_USEDEP}]
	dev-python/cooler[${PYTHON_USEDEP}]
	dev-python/pairtools[${PYTHON_USEDEP}]
	mappy? ( dev-python/mappy[${PYTHON_USEDEP}] )

Manifest for 3.2.4

Type File Size Source URLs
DIST hicstuff-3.2.4.tar.gz 108586 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/hicstuff/hicstuff-3.2.4.tar.gz