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dev-python/scdef - 0.3.8 (pypi)

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Package Information

Description:
Extract hierarchical signatures of cell state from single-cell data.
Homepage:
https://github.com/cbg-ethz/scdef
License:
MIT

Ebuild Details

Version EAPI Keywords Slot
0.3.8 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python3_11 )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Extract hierarchical signatures of cell state from single-cell data."

HOMEPAGE="https://github.com/cbg-ethz/scdef"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="<dev-python/pandas-3.0.0[${PYTHON_USEDEP}]
	<dev-python/numpy-2.0.0[${PYTHON_USEDEP}]
	dev-python/jax[${PYTHON_USEDEP}]
	dev-python/jaxlib[${PYTHON_USEDEP}]
	dev-python/optax[${PYTHON_USEDEP}]
	dev-python/tensorflow-probability[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/anndata[${PYTHON_USEDEP}]
	<dev-python/click-9.0.0[${PYTHON_USEDEP}]
	<dev-python/tqdm-5.0.0[${PYTHON_USEDEP}]
	<dev-python/graphviz-0.15.0[${PYTHON_USEDEP}]
	dev-python/igraph[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	dev-python/decoupler[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

Dependencies

RDEPEND

<dev-python/pandas-3.0.0[${PYTHON_USEDEP}]
	<dev-python/numpy-2.0.0[${PYTHON_USEDEP}]
	dev-python/jax[${PYTHON_USEDEP}]
	dev-python/jaxlib[${PYTHON_USEDEP}]
	dev-python/optax[${PYTHON_USEDEP}]
	dev-python/tensorflow-probability[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/anndata[${PYTHON_USEDEP}]
	<dev-python/click-9.0.0[${PYTHON_USEDEP}]
	<dev-python/tqdm-5.0.0[${PYTHON_USEDEP}]
	<dev-python/graphviz-0.15.0[${PYTHON_USEDEP}]
	dev-python/igraph[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	dev-python/decoupler[${PYTHON_USEDEP}]

BDEPEND

<dev-python/pandas-3.0.0[${PYTHON_USEDEP}]
	<dev-python/numpy-2.0.0[${PYTHON_USEDEP}]
	dev-python/jax[${PYTHON_USEDEP}]
	dev-python/jaxlib[${PYTHON_USEDEP}]
	dev-python/optax[${PYTHON_USEDEP}]
	dev-python/tensorflow-probability[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/anndata[${PYTHON_USEDEP}]
	<dev-python/click-9.0.0[${PYTHON_USEDEP}]
	<dev-python/tqdm-5.0.0[${PYTHON_USEDEP}]
	<dev-python/graphviz-0.15.0[${PYTHON_USEDEP}]
	dev-python/igraph[${PYTHON_USEDEP}]
	dev-python/numba[${PYTHON_USEDEP}]
	dev-python/decoupler[${PYTHON_USEDEP}]

Manifest for 0.3.8

Type File Size Source URLs
DIST scdef-0.3.8.tar.gz 46290 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/scdef/scdef-0.3.8.tar.gz