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dev-python/sequana - 0.19.6 (pypi)

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Package Information

Description:: A set of standalone application and pipelines dedicated to NGS analysis
Homepage:: https://sequana.readthedocs.io
License:: BSD 3-Clause License

Ebuild Details

Version	EAPI	Keywords	Slot
0.19.6	8	~amd64 ~x86	0

View Raw Ebuild

# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="A set of standalone application and pipelines dedicated to NGS analysis"

HOMEPAGE="https://sequana.readthedocs.io"
LICENSE="BSD 3-Clause License"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="<dev-python/aiohttp-4.0.0[${PYTHON_USEDEP}]
	dev-python/adjustText[${PYTHON_USEDEP}]
	dev-python/bioservices[${PYTHON_USEDEP}]
	dev-python/brokenaxes[${PYTHON_USEDEP}]
	dev-python/bx-python[${PYTHON_USEDEP}]
	<dev-python/click-9.0.0[${PYTHON_USEDEP}]
	>=dev-python/colorlog-6.9.0[${PYTHON_USEDEP}]
	dev-python/colormap[${PYTHON_USEDEP}]
	>=dev-python/cython-3.0.11[${PYTHON_USEDEP}]
	>=dev-python/deprecated-1.2.15[${PYTHON_USEDEP}]
	dev-python/easydev[${PYTHON_USEDEP}]
	dev-python/gseapy[${PYTHON_USEDEP}]
	dev-python/itolapi[${PYTHON_USEDEP}]
	>dev-python/matplotlib-3.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-2.2.3[${PYTHON_USEDEP}]
	>=dev-python/pandas-2.2.3[${PYTHON_USEDEP}]
	>=dev-python/plotly-5.24.1[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	>=dev-python/rich-click-1.7.2[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-1.6.1[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.14[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.13.2[${PYTHON_USEDEP}]
	<dev-python/selenium-5.0.0[${PYTHON_USEDEP}]
	dev-python/snakemake[${PYTHON_USEDEP}]
	>=dev-python/statsmodels-0.14[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.66.1[${PYTHON_USEDEP}]
	dev-python/UpSetPlot[${PYTHON_USEDEP}]
	>=dev-python/xlrd-2.0[${PYTHON_USEDEP}]
	dev-python/vcfpy[${PYTHON_USEDEP}]
	dev-python/multiqc[${PYTHON_USEDEP}]
	dev-python/PuLP[${PYTHON_USEDEP}]
	dev-python/kaleido[${PYTHON_USEDEP}]
	>=dev-python/natsort-8.4.0[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

Dependencies

RDEPEND

<dev-python/aiohttp-4.0.0[${PYTHON_USEDEP}]
	dev-python/adjustText[${PYTHON_USEDEP}]
	dev-python/bioservices[${PYTHON_USEDEP}]
	dev-python/brokenaxes[${PYTHON_USEDEP}]
	dev-python/bx-python[${PYTHON_USEDEP}]
	<dev-python/click-9.0.0[${PYTHON_USEDEP}]
	>=dev-python/colorlog-6.9.0[${PYTHON_USEDEP}]
	dev-python/colormap[${PYTHON_USEDEP}]
	>=dev-python/cython-3.0.11[${PYTHON_USEDEP}]
	>=dev-python/deprecated-1.2.15[${PYTHON_USEDEP}]
	dev-python/easydev[${PYTHON_USEDEP}]
	dev-python/gseapy[${PYTHON_USEDEP}]
	dev-python/itolapi[${PYTHON_USEDEP}]
	>dev-python/matplotlib-3.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-2.2.3[${PYTHON_USEDEP}]
	>=dev-python/pandas-2.2.3[${PYTHON_USEDEP}]
	>=dev-python/plotly-5.24.1[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	>=dev-python/rich-click-1.7.2[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-1.6.1[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.14[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.13.2[${PYTHON_USEDEP}]
	<dev-python/selenium-5.0.0[${PYTHON_USEDEP}]
	dev-python/snakemake[${PYTHON_USEDEP}]
	>=dev-python/statsmodels-0.14[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.66.1[${PYTHON_USEDEP}]
	dev-python/UpSetPlot[${PYTHON_USEDEP}]
	>=dev-python/xlrd-2.0[${PYTHON_USEDEP}]
	dev-python/vcfpy[${PYTHON_USEDEP}]
	dev-python/multiqc[${PYTHON_USEDEP}]
	dev-python/PuLP[${PYTHON_USEDEP}]
	dev-python/kaleido[${PYTHON_USEDEP}]
	>=dev-python/natsort-8.4.0[${PYTHON_USEDEP}]

BDEPEND

<dev-python/aiohttp-4.0.0[${PYTHON_USEDEP}]
	dev-python/adjustText[${PYTHON_USEDEP}]
	dev-python/bioservices[${PYTHON_USEDEP}]
	dev-python/brokenaxes[${PYTHON_USEDEP}]
	dev-python/bx-python[${PYTHON_USEDEP}]
	<dev-python/click-9.0.0[${PYTHON_USEDEP}]
	>=dev-python/colorlog-6.9.0[${PYTHON_USEDEP}]
	dev-python/colormap[${PYTHON_USEDEP}]
	>=dev-python/cython-3.0.11[${PYTHON_USEDEP}]
	>=dev-python/deprecated-1.2.15[${PYTHON_USEDEP}]
	dev-python/easydev[${PYTHON_USEDEP}]
	dev-python/gseapy[${PYTHON_USEDEP}]
	dev-python/itolapi[${PYTHON_USEDEP}]
	>dev-python/matplotlib-3.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-2.2.3[${PYTHON_USEDEP}]
	>=dev-python/pandas-2.2.3[${PYTHON_USEDEP}]
	>=dev-python/plotly-5.24.1[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	>=dev-python/rich-click-1.7.2[${PYTHON_USEDEP}]
	>=dev-python/scikit-learn-1.6.1[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.14[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.13.2[${PYTHON_USEDEP}]
	<dev-python/selenium-5.0.0[${PYTHON_USEDEP}]
	dev-python/snakemake[${PYTHON_USEDEP}]
	>=dev-python/statsmodels-0.14[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.66.1[${PYTHON_USEDEP}]
	dev-python/UpSetPlot[${PYTHON_USEDEP}]
	>=dev-python/xlrd-2.0[${PYTHON_USEDEP}]
	dev-python/vcfpy[${PYTHON_USEDEP}]
	dev-python/multiqc[${PYTHON_USEDEP}]
	dev-python/PuLP[${PYTHON_USEDEP}]
	dev-python/kaleido[${PYTHON_USEDEP}]
	>=dev-python/natsort-8.4.0[${PYTHON_USEDEP}]

Manifest for 0.19.6

Type	File	Size	Source URLs
DIST	sequana-0.19.6.tar.gz	2383563 bytes	https://files.pythonhosted.org/packages/source/${REALNAME::1}/sequana/sequana-0.19.6.tar.gz