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dev-python/spliceai - 1.3.1 (pypi)

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Package Information

Description:
SpliceAI: A deep learning-based tool to identify splice variants
Homepage:
https://github.com/illumina/SpliceAI
License:
GPL-3

Ebuild Details

Version EAPI Keywords Slot
1.3.1 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="SpliceAI: A deep learning-based tool to identify splice variants"

HOMEPAGE="https://github.com/illumina/SpliceAI"
LICENSE="GPL-3"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="cpu gpu"
DEPENDENCIES="dev-python/keras[${PYTHON_USEDEP}]
	dev-python/pyfaidx[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.14.0[${PYTHON_USEDEP}]
	>=dev-python/pandas-0.24.2[${PYTHON_USEDEP}]
	cpu? ( dev-python/tensorflow[${PYTHON_USEDEP}] )
	gpu? ( dev-python/tensorflow-gpu[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

USE Flags

cpu
gpu

Dependencies

RDEPEND

dev-python/keras[${PYTHON_USEDEP}]
	dev-python/pyfaidx[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.14.0[${PYTHON_USEDEP}]
	>=dev-python/pandas-0.24.2[${PYTHON_USEDEP}]
	cpu? ( dev-python/tensorflow[${PYTHON_USEDEP}] )
	gpu? ( dev-python/tensorflow-gpu[${PYTHON_USEDEP}] )

BDEPEND

dev-python/keras[${PYTHON_USEDEP}]
	dev-python/pyfaidx[${PYTHON_USEDEP}]
	dev-python/pysam[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.14.0[${PYTHON_USEDEP}]
	>=dev-python/pandas-0.24.2[${PYTHON_USEDEP}]
	cpu? ( dev-python/tensorflow[${PYTHON_USEDEP}] )
	gpu? ( dev-python/tensorflow-gpu[${PYTHON_USEDEP}] )

Manifest for 1.3.1

Type File Size Source URLs
DIST spliceai-1.3.1.tar.gz 16669756 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/spliceai/spliceai-1.3.1.tar.gz