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dev-python/tiledbsoma - 2.3.0 (pypi)

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Package Information

Description:: Python API for efficient storage and retrieval of single-cell data using TileDB
Homepage:: https://github.com/single-cell-data/TileDB-SOMA/tree/main/apis/python
License:: MIT

Ebuild Details

Version	EAPI	Keywords	Slot
2.3.0	8	~amd64 ~x86	0

View Raw Ebuild

# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Python API for efficient storage and retrieval of single-cell data using TileDB"

HOMEPAGE="https://github.com/single-cell-data/TileDB-SOMA/tree/main/apis/python"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="all dev spatial-io"
DEPENDENCIES="dev-python/anndata[${PYTHON_USEDEP}]
	>=dev-python/attrs-22.2[${PYTHON_USEDEP}]
	dev-python/more-itertools[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]
	<dev-python/pandas-3.0.0[${PYTHON_USEDEP}]
	dev-python/pyarrow[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/somacore[${PYTHON_USEDEP}]
	>=dev-python/typing-extensions-4.5.0[${PYTHON_USEDEP}]
	dev? ( dev-python/black[${PYTHON_USEDEP}] )
	dev? ( dev-python/dask[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	dev? ( dev-python/ruff[${PYTHON_USEDEP}] )
	dev? ( dev-python/sparse[${PYTHON_USEDEP}] )
	dev? ( ~dev-python/typeguard-4.4.2[${PYTHON_USEDEP}] )
	dev? ( dev-python/types-setuptools[${PYTHON_USEDEP}] )
	dev? ( dev-python/more-itertools[${PYTHON_USEDEP}] )
	dev? ( dev-python/hypothesis[${PYTHON_USEDEP}] )
	dev? ( dev-python/deepdiff[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/geopandas[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/tifffile[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/pillow[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/spatialdata[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/xarray[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/dask[${PYTHON_USEDEP}] )
	all? ( dev-python/black[${PYTHON_USEDEP}] )
	all? ( dev-python/dask[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	all? ( dev-python/ruff[${PYTHON_USEDEP}] )
	all? ( dev-python/sparse[${PYTHON_USEDEP}] )
	all? ( ~dev-python/typeguard-4.4.2[${PYTHON_USEDEP}] )
	all? ( dev-python/types-setuptools[${PYTHON_USEDEP}] )
	all? ( dev-python/more-itertools[${PYTHON_USEDEP}] )
	all? ( dev-python/hypothesis[${PYTHON_USEDEP}] )
	all? ( dev-python/deepdiff[${PYTHON_USEDEP}] )
	all? ( dev-python/geopandas[${PYTHON_USEDEP}] )
	all? ( dev-python/tifffile[${PYTHON_USEDEP}] )
	all? ( dev-python/pillow[${PYTHON_USEDEP}] )
	all? ( dev-python/spatialdata[${PYTHON_USEDEP}] )
	all? ( dev-python/xarray[${PYTHON_USEDEP}] )
	all? ( dev-python/dask[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

USE Flags

all

dev

spatial-io

Dependencies

RDEPEND

dev-python/anndata[${PYTHON_USEDEP}]
	>=dev-python/attrs-22.2[${PYTHON_USEDEP}]
	dev-python/more-itertools[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]
	<dev-python/pandas-3.0.0[${PYTHON_USEDEP}]
	dev-python/pyarrow[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/somacore[${PYTHON_USEDEP}]
	>=dev-python/typing-extensions-4.5.0[${PYTHON_USEDEP}]
	dev? ( dev-python/black[${PYTHON_USEDEP}] )
	dev? ( dev-python/dask[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	dev? ( dev-python/ruff[${PYTHON_USEDEP}] )
	dev? ( dev-python/sparse[${PYTHON_USEDEP}] )
	dev? ( ~dev-python/typeguard-4.4.2[${PYTHON_USEDEP}] )
	dev? ( dev-python/types-setuptools[${PYTHON_USEDEP}] )
	dev? ( dev-python/more-itertools[${PYTHON_USEDEP}] )
	dev? ( dev-python/hypothesis[${PYTHON_USEDEP}] )
	dev? ( dev-python/deepdiff[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/geopandas[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/tifffile[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/pillow[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/spatialdata[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/xarray[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/dask[${PYTHON_USEDEP}] )
	all? ( dev-python/black[${PYTHON_USEDEP}] )
	all? ( dev-python/dask[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	all? ( dev-python/ruff[${PYTHON_USEDEP}] )
	all? ( dev-python/sparse[${PYTHON_USEDEP}] )
	all? ( ~dev-python/typeguard-4.4.2[${PYTHON_USEDEP}] )
	all? ( dev-python/types-setuptools[${PYTHON_USEDEP}] )
	all? ( dev-python/more-itertools[${PYTHON_USEDEP}] )
	all? ( dev-python/hypothesis[${PYTHON_USEDEP}] )
	all? ( dev-python/deepdiff[${PYTHON_USEDEP}] )
	all? ( dev-python/geopandas[${PYTHON_USEDEP}] )
	all? ( dev-python/tifffile[${PYTHON_USEDEP}] )
	all? ( dev-python/pillow[${PYTHON_USEDEP}] )
	all? ( dev-python/spatialdata[${PYTHON_USEDEP}] )
	all? ( dev-python/xarray[${PYTHON_USEDEP}] )
	all? ( dev-python/dask[${PYTHON_USEDEP}] )

BDEPEND

dev-python/anndata[${PYTHON_USEDEP}]
	>=dev-python/attrs-22.2[${PYTHON_USEDEP}]
	dev-python/more-itertools[${PYTHON_USEDEP}]
	dev-python/numpy[${PYTHON_USEDEP}]
	<dev-python/pandas-3.0.0[${PYTHON_USEDEP}]
	dev-python/pyarrow[${PYTHON_USEDEP}]
	dev-python/scanpy[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/somacore[${PYTHON_USEDEP}]
	>=dev-python/typing-extensions-4.5.0[${PYTHON_USEDEP}]
	dev? ( dev-python/black[${PYTHON_USEDEP}] )
	dev? ( dev-python/dask[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest[${PYTHON_USEDEP}] )
	dev? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	dev? ( dev-python/ruff[${PYTHON_USEDEP}] )
	dev? ( dev-python/sparse[${PYTHON_USEDEP}] )
	dev? ( ~dev-python/typeguard-4.4.2[${PYTHON_USEDEP}] )
	dev? ( dev-python/types-setuptools[${PYTHON_USEDEP}] )
	dev? ( dev-python/more-itertools[${PYTHON_USEDEP}] )
	dev? ( dev-python/hypothesis[${PYTHON_USEDEP}] )
	dev? ( dev-python/deepdiff[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/geopandas[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/tifffile[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/pillow[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/spatialdata[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/xarray[${PYTHON_USEDEP}] )
	spatial-io? ( dev-python/dask[${PYTHON_USEDEP}] )
	all? ( dev-python/black[${PYTHON_USEDEP}] )
	all? ( dev-python/dask[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest[${PYTHON_USEDEP}] )
	all? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )
	all? ( dev-python/ruff[${PYTHON_USEDEP}] )
	all? ( dev-python/sparse[${PYTHON_USEDEP}] )
	all? ( ~dev-python/typeguard-4.4.2[${PYTHON_USEDEP}] )
	all? ( dev-python/types-setuptools[${PYTHON_USEDEP}] )
	all? ( dev-python/more-itertools[${PYTHON_USEDEP}] )
	all? ( dev-python/hypothesis[${PYTHON_USEDEP}] )
	all? ( dev-python/deepdiff[${PYTHON_USEDEP}] )
	all? ( dev-python/geopandas[${PYTHON_USEDEP}] )
	all? ( dev-python/tifffile[${PYTHON_USEDEP}] )
	all? ( dev-python/pillow[${PYTHON_USEDEP}] )
	all? ( dev-python/spatialdata[${PYTHON_USEDEP}] )
	all? ( dev-python/xarray[${PYTHON_USEDEP}] )
	all? ( dev-python/dask[${PYTHON_USEDEP}] )

Manifest for 2.3.0

Type	File	Size	Source URLs
DIST	tiledbsoma-2.3.0.tar.gz	787965 bytes	https://files.pythonhosted.org/packages/source/${REALNAME::1}/tiledbsoma/tiledbsoma-2.3.0.tar.gz