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dev-python/treesapp - 0.11.4 (pypi)

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Package Information

Description:
TreeSAPP is a functional and taxonomic annotation tool for genomes and metagenomes.
Homepage:
https://github.com/hallamlab/TreeSAPP
License:
GPL-3

Ebuild Details

Version EAPI Keywords Slot
0.11.4 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="TreeSAPP is a functional and taxonomic annotation tool for genomes and metagenomes."

HOMEPAGE="https://github.com/hallamlab/TreeSAPP"
LICENSE="GPL-3"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="test"
DEPENDENCIES="dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/ete3[${PYTHON_USEDEP}]
	~dev-python/joblib-1.0.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.19.2[${PYTHON_USEDEP}]
	>=dev-python/packaging-20.4[${PYTHON_USEDEP}]
	dev-python/pyfastx[${PYTHON_USEDEP}]
	dev-python/pygtrie[${PYTHON_USEDEP}]
	dev-python/samsum[${PYTHON_USEDEP}]
	~dev-python/scikit-learn-0.24.2[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.5.2[${PYTHON_USEDEP}]
	>=dev-python/six-1.15.0[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.11.0[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.50.0[${PYTHON_USEDEP}]
	>=dev-python/pytest-6.2.5[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.1.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.3.0[${PYTHON_USEDEP}]
	test? ( dev-python/pytest[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

USE Flags

test

Dependencies

RDEPEND

dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/ete3[${PYTHON_USEDEP}]
	~dev-python/joblib-1.0.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.19.2[${PYTHON_USEDEP}]
	>=dev-python/packaging-20.4[${PYTHON_USEDEP}]
	dev-python/pyfastx[${PYTHON_USEDEP}]
	dev-python/pygtrie[${PYTHON_USEDEP}]
	dev-python/samsum[${PYTHON_USEDEP}]
	~dev-python/scikit-learn-0.24.2[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.5.2[${PYTHON_USEDEP}]
	>=dev-python/six-1.15.0[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.11.0[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.50.0[${PYTHON_USEDEP}]
	>=dev-python/pytest-6.2.5[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.1.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.3.0[${PYTHON_USEDEP}]
	test? ( dev-python/pytest[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )

BDEPEND

dev-python/biopython[${PYTHON_USEDEP}]
	dev-python/ete3[${PYTHON_USEDEP}]
	~dev-python/joblib-1.0.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.19.2[${PYTHON_USEDEP}]
	>=dev-python/packaging-20.4[${PYTHON_USEDEP}]
	dev-python/pyfastx[${PYTHON_USEDEP}]
	dev-python/pygtrie[${PYTHON_USEDEP}]
	dev-python/samsum[${PYTHON_USEDEP}]
	~dev-python/scikit-learn-0.24.2[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.5.2[${PYTHON_USEDEP}]
	>=dev-python/six-1.15.0[${PYTHON_USEDEP}]
	>=dev-python/seaborn-0.11.0[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.50.0[${PYTHON_USEDEP}]
	>=dev-python/pytest-6.2.5[${PYTHON_USEDEP}]
	>=dev-python/pandas-1.1.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-3.3.0[${PYTHON_USEDEP}]
	test? ( dev-python/pytest[${PYTHON_USEDEP}] )
	test? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )

Manifest for 0.11.4

Type File Size Source URLs
DIST treesapp-0.11.4.tar.gz 11246105 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/treesapp/treesapp-0.11.4.tar.gz