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dev-python/vollseg - 32.4.0 (pypi)

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Package Information

Description:
Segmentation tool for biological cells of irregular size and shape in 3D and 2D.
Homepage:
https://github.com/Kapoorlabs-CAPED/vollseg
License:
BSD

Ebuild Details

Version EAPI Keywords Slot
32.4.0 8 ~amd64 ~x86 0
View Raw Ebuild 
# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="Segmentation tool for biological cells of irregular size and shape in 3D and 2D."

HOMEPAGE="https://github.com/Kapoorlabs-CAPED/vollseg"
LICENSE="BSD"
SRC_URI="https://files.pythonhosted.org/packages/source/${REALNAME::1}/${REALNAME}/${REALNAME}-${REALVERSION}.tar.gz"
SOURCEFILE="${REALNAME}-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE="testing"
DEPENDENCIES="dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/tifffile[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	dev-python/napari[${PYTHON_USEDEP}]
	dev-python/cellpose[${PYTHON_USEDEP}]
	dev-python/torch[${PYTHON_USEDEP}]
	dev-python/test-tube[${PYTHON_USEDEP}]
	dev-python/lightning[${PYTHON_USEDEP}]
	dev-python/pynvml[${PYTHON_USEDEP}]
	dev-python/poetry[${PYTHON_USEDEP}]
	dev-python/stardist[${PYTHON_USEDEP}]
	testing? ( dev-python/tox[${PYTHON_USEDEP}] )
	testing? ( dev-python/pytest[${PYTHON_USEDEP}] )
	testing? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"

USE Flags

testing

Dependencies

RDEPEND

dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/tifffile[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	dev-python/napari[${PYTHON_USEDEP}]
	dev-python/cellpose[${PYTHON_USEDEP}]
	dev-python/torch[${PYTHON_USEDEP}]
	dev-python/test-tube[${PYTHON_USEDEP}]
	dev-python/lightning[${PYTHON_USEDEP}]
	dev-python/pynvml[${PYTHON_USEDEP}]
	dev-python/poetry[${PYTHON_USEDEP}]
	dev-python/stardist[${PYTHON_USEDEP}]
	testing? ( dev-python/tox[${PYTHON_USEDEP}] )
	testing? ( dev-python/pytest[${PYTHON_USEDEP}] )
	testing? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )

BDEPEND

dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/tifffile[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	dev-python/napari[${PYTHON_USEDEP}]
	dev-python/cellpose[${PYTHON_USEDEP}]
	dev-python/torch[${PYTHON_USEDEP}]
	dev-python/test-tube[${PYTHON_USEDEP}]
	dev-python/lightning[${PYTHON_USEDEP}]
	dev-python/pynvml[${PYTHON_USEDEP}]
	dev-python/poetry[${PYTHON_USEDEP}]
	dev-python/stardist[${PYTHON_USEDEP}]
	testing? ( dev-python/tox[${PYTHON_USEDEP}] )
	testing? ( dev-python/pytest[${PYTHON_USEDEP}] )
	testing? ( dev-python/pytest-cov[${PYTHON_USEDEP}] )

Manifest for 32.4.0

Type File Size Source URLs
DIST vollseg-32.4.0.tar.gz 84890 bytes https://files.pythonhosted.org/packages/source/${REALNAME::1}/vollseg/vollseg-32.4.0.tar.gz