dev-python/pyfaidx - 0.9.0.4 (science)

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Install

Install this version:

emerge -a =dev-python/pyfaidx-0.9.0.4

If this version is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask =dev-python/pyfaidx-0.9.0.4

Or alternatively:

emerge --autounmask-write -a =dev-python/pyfaidx-0.9.0.4

Package Information

Description:
Efficient pythonic random access to fasta subsequences
Homepage:
https://github.com/mdshw5/pyfaidx
License:
MIT

Ebuild Details

Version EAPI Keywords Slot
0.9.0.4 8 ~amd64 ~x86 0
View Raw Ebuild
# Copyright 1999-2026 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=8

DISTUTILS_USE_PEP517=setuptools
PYTHON_COMPAT=( python3_{12..13} )

inherit distutils-r1 pypi

DESCRIPTION="Efficient pythonic random access to fasta subsequences"
HOMEPAGE="https://github.com/mdshw5/pyfaidx"

LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64 ~x86"

DEPEND=">=sci-biology/pysam-0.23.1[${PYTHON_USEDEP}]"
REPEND="dev-python/importlib_metadata[${PYTHON_USEDEP}]"

EPYTEST_DESELECT=(
	# needs external file
	tests/test_Fasta_bgzip.py
)

EPYTEST_PLUGINS=()

distutils_enable_tests pytest

Inherited Eclasses

Dependencies

DEPEND

>=sci-biology/pysam-0.23.1[]