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Install

Install this package:

emerge -a sci-biology/SEECER

If the package is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask sci-biology/SEECER

Or alternatively:

emerge --autounmask-write -a sci-biology/SEECER

Package Information

Description:

SEquence Error Corrector for RNA-Seq reads

Homepage:

http://sb.cs.cmu.edu/seecer/

License:

GPL-3

Versions

Metadata

Maintainers

• Martin Mokrejs (mmokrejs@fold.natur.cuni.cz) - Type: person
• Gentoo Biology Project (sci-biology@gentoo.org) - Type: project

<pkgmetadata>
	<maintainer type="person">
		<email>mmokrejs@fold.natur.cuni.cz</email>
		<name>Martin Mokrejs</name>
	</maintainer>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
</pkgmetadata>

Lint Warnings

• [Error] Missing md5-cache for ebuild SEECER-0.1.3-r3
• [Error] Missing md5-cache for ebuild SEECER-0.1.3-r2

Files

• SEECER-increase-max-sequence-length.patch
• SEECER-remove-flags.patch
• remove-hardcoded-paths.patch
• rename_jellyfish_binary.patch
• replace_ids.cc
• run_jellyfish.sh.patch
• run_seecer.sh.patch

Manifest