sci-biology/VarScan (science)

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Masked: This package is masked.

Reason: Needs sci-biology/bam-readcount.

Masked by Alexander Puck Neuwirth on 2025-01-10

Install

Install this package:

emerge -a sci-biology/VarScan

If the package is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask sci-biology/VarScan

Or alternatively:

emerge --autounmask-write -a sci-biology/VarScan

Package Information

Description:
Variant detection (germline, multi-sample, somatic mutations, CNA, SNP calls)
Homepage:
http://varscan.sourceforge.net/
License:
Non-profit-OSL-3.0

Versions

Version EAPI Keywords Slot
2.4.4 8 ~amd64 0

Metadata

Maintainers

Upstream

Raw Metadata XML
<pkgmetadata>
	<maintainer type="project">
		<email>sci@gentoo.org</email>
		<name>Gentoo Science Project</name>
	</maintainer>
	<upstream>
		<remote-id type="github">dkoboldt/varscan</remote-id>
		<remote-id type="sourceforge">varscan</remote-id>
	</upstream>
</pkgmetadata>

Lint Warnings

Manifest

Type File Size Versions
DIST VarScan.v2.4.4.source.jar 208377 bytes 2.4.4
Unmatched Entries
Type File Size