sci-biology/VelvetOptimiser - 2.2.6 (science)

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Package Information

Description:
Optimise Velvet sequence assembler
Homepage:
https://vicbioinformatics.com/software.velvetoptimiser.shtml
License:
GPL-2

Ebuild Details

Version EAPI Keywords Slot
2.2.6 7 ~amd64 0
View Raw Ebuild
# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=7

inherit perl-functions

DESCRIPTION="Optimise Velvet sequence assembler"
HOMEPAGE="https://vicbioinformatics.com/software.velvetoptimiser.shtml"
SRC_URI="https://github.com/tseemann/VelvetOptimiser/archive/${PV}.tar.gz -> ${P}.tar.gz"

LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64"

RDEPEND="
	>=sci-biology/bioperl-1.4
	>=sci-biology/velvet-0.7.5.1
	dev-lang/perl[perl_features_ithreads]" # actually >=5.8 but make sure 5.16 is recognized as > 5.8, heh

src_install(){
	dobin VelvetOptimiser.pl
	perl_set_version
	perl_domodule VelvetOpt/*.pm
	einstalldocs
}

Dependencies

RDEPEND

	>=sci-biology/bioperl-1.4
	>=sci-biology/velvet-0.7.5.1
	dev-lang/perl[perl_features_ithreads]

Manifest for 2.2.6

Type File Size Source URLs
DIST VelvetOptimiser-2.2.6.tar.gz 5885844 bytes https://github.com/tseemann/VelvetOptimiser/archive/2.2.6.tar.gz