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Package Information

Description:

Align DNA reads to a population of genomes

Homepage:

https://daehwankimlab.github.io/hisat2 https://github.com/DaehwanKimLab/hisat2

License:

GPL-3+

Versions

Metadata

Maintainers

• Martin Mokrejs (mmokrejs@fold.natur.cuni.cz) - Type: person
• Gentoo Biology Project (sci-biology@gentoo.org) - Type: project

Upstream

• Remote IDs:
  • github: DaehwanKimLab/hisat2

<pkgmetadata>
	<maintainer type="person">
		<email>mmokrejs@fold.natur.cuni.cz</email>
		<name>Martin Mokrejs</name>
	</maintainer>
	<maintainer type="project">
		<email>sci-biology@gentoo.org</email>
		<name>Gentoo Biology Project</name>
	</maintainer>
	<upstream>
		<remote-id type="github">DaehwanKimLab/hisat2</remote-id>
	</upstream>
</pkgmetadata>

Lint Warnings

• [Warning] Ebuild 2.2.1 uses IUSE flag 'cpu_flags_x86_sse2' which is not documented in metadata.xml. Add the flag to metadata.xml <use> section.
• [Warning] Missing md5-cache for version 2.2.1. Run 'ebuild <ebuild_file> manifest' or 'egencache' to generate it.

USE Flags

Files

• hisat2-2.2.1-respect_CXXFLAGS.patch

Manifest