Gentoo Packages

sci-libs/spyking-circus - 1.1.0 (science)

Search

Install

Install this version:

emerge -a =sci-libs/spyking-circus-1.1.0

If this version is masked, you can unmask it using the autounmask tool or standard emerge options:

autounmask =sci-libs/spyking-circus-1.1.0

Or alternatively:

emerge --autounmask-write -a =sci-libs/spyking-circus-1.1.0

Package Information

Description:
Fast spike sorting by template matching
Homepage:
https://github.com/spyking-circus/spyking-circus/
License:
CeCILL-2

Ebuild Details

Version EAPI Keywords Slot
1.1.0 8 ~amd64 0
View Raw Ebuild 
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=8

DISTUTILS_USE_PEP517=setuptools
PYTHON_COMPAT=( python3_13 )

inherit distutils-r1

DESCRIPTION="Fast spike sorting by template matching"
HOMEPAGE="https://github.com/spyking-circus/spyking-circus/"
SRC_URI="https://github.com/spyking-circus/spyking-circus/archive/${PV}.tar.gz -> ${P}.tar.gz"

LICENSE="CeCILL-2"
SLOT="0"
KEYWORDS="~amd64"

# Wants to run mpirun (and fails)
RESTRICT="test"

RDEPEND="
	>=dev-python/blosc-1.8[${PYTHON_USEDEP}]
	>=dev-python/colorama-0.4.1[${PYTHON_USEDEP}]
	>=dev-python/cython-0.29.14[${PYTHON_USEDEP}]
	>=dev-python/h5py-2.9.0[${PYTHON_USEDEP}]
	>=dev-python/matplotlib-2.2.4[${PYTHON_USEDEP}]
	>=dev-python/mpi4py-3.0.0[${PYTHON_USEDEP}]
	>=dev-python/numpy-1.17.4[${PYTHON_USEDEP}]
	>=dev-python/psutil-5.6.7[${PYTHON_USEDEP}]
	dev-python/statsmodels[${PYTHON_USEDEP}]
	>=dev-python/tqdm-4.40.0[${PYTHON_USEDEP}]
	>=dev-python/scipy-1.3.1[${PYTHON_USEDEP}]
"
DEPEND="${RDEPEND}"

distutils_enable_sphinx docs_sphinx --no-autodoc
distutils_enable_tests pytest

Inherited Eclasses

distutils-r1

Dependencies

DEPEND

	>=dev-python/blosc-1.8[]
	>=dev-python/colorama-0.4.1[]
	>=dev-python/cython-0.29.14[]
	>=dev-python/h5py-2.9.0[]
	>=dev-python/matplotlib-2.2.4[]
	>=dev-python/mpi4py-3.0.0[]
	>=dev-python/numpy-1.17.4[]
	>=dev-python/psutil-5.6.7[]
	dev-python/statsmodels[]
	>=dev-python/tqdm-4.40.0[]
	>=dev-python/scipy-1.3.1[]

RDEPEND

	>=dev-python/blosc-1.8[]
	>=dev-python/colorama-0.4.1[]
	>=dev-python/cython-0.29.14[]
	>=dev-python/h5py-2.9.0[]
	>=dev-python/matplotlib-2.2.4[]
	>=dev-python/mpi4py-3.0.0[]
	>=dev-python/numpy-1.17.4[]
	>=dev-python/psutil-5.6.7[]
	dev-python/statsmodels[]
	>=dev-python/tqdm-4.40.0[]
	>=dev-python/scipy-1.3.1[]

Manifest for 1.1.0

Type File Size Source URLs
DIST spyking-circus-1.1.0.tar.gz 4822364 bytes https://github.com/spyking-circus/spyking-circus/archive/1.1.0.tar.gz